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Title: MOLECULAR IDENTIFICATION AND GROWTH OF XENORHABDUS AND PHOTORHABDUS SYMBIONTS OF ENTOMOPATHOGENIC NEMATODES
Authors: Ali Murad rahoo, Rehana Kanwal Rahoo, Muhammad Saeed, Muhammad Burhan, Nusrat Keerio
Journal: Plant Protection
Publisher: Center for Community Learning
Country: Pakistan
Year: 2022
Volume: 6
Issue: 2
Language: English
Keywords: Molecular IdentificationGrowthXenorhabdus bovieniiPhotorhabdus luminescensPhylogeny
From the characterisation, the partial 16 S gene sequences obtained for the two bacteria were subjected to blast-bootstrap analysis to obtain the phylogenetic tree. In assessing the similarity of Xenorhabdus bovienii with five other Xenorhabdus spp., it was found to be 96% similar to X. nematophila and X. japonica with Accession Numbers D78006 and NR027194 respectively. The X. bovienii was closer to X. beddingii 95% and X. kazodoii and 97% similarity to X. poinarii . From the phylogenetic tree, the two species of bacteria were found to belong to the genera Xenorhabadus and Photorhabdus . The two bacteria were compared with Xenorhabdus japonica NR027194, X. nematophila , D78006 X. poinarii DQ211703, X. beddingii AY278675 and X. kozodoii Eu 190977. The results showed that at 20 ℃ both the bacteria X. bovienii and Photorhabdus luminescens increased to a log concentration of 7.5 after 6 h. They then increased slightly up to 15 h. At 25 ℃ X. bovienii had a concentration of 6.1 after 1 h but only increased slowly to 6.6 after 15 h. However, P. luminescens started with 5.6 after 1 h but increased smoothly to 7.5 after 15 h. X. bovienii and P. luminescens at 30 ℃ had a concentration of 6.2 after 1 h.
To confirm the identity of Xenorhabdus bovienii and Photorhabdus luminescens, establish similarities among these bacteria, and determine their growth at 20, 25, and 30°C.
The study involved molecular identification using partial 16S gene sequences and blast-bootstrap analysis for phylogenetic tree construction. DNA extraction, Polymerase Chain Reaction (PCR), gel electrophoresis, and DNA sequencing were performed. Bacterial growth was monitored by measuring optical density at 600 nm at hourly intervals for 15 hours at three different temperatures (20, 25, and 30°C).
graph TD
A[Isolate Bacteria from Nematodes] --> B[Perform Gram Staining];
B --> C[Extract DNA];
C --> D[Perform PCR];
D --> E[Analyze DNA Bands via Gel Electrophoresis];
E --> F[Sequence DNA];
F --> G[Perform Blast-Bootstrap Analysis for Phylogeny];
G --> H[Culture Bacteria at 20, 25, 30°C];
H --> I[Measure Bacterial Concentration Over Time];
I --> J[Analyze Growth Curves];
J --> K[Compare Similarity with Known Species];
K --> L[Draw Conclusions];
The molecular identification confirmed the bacteria as Xenorhabdus bovienii and Photorhabdus luminescens, with high similarity to known species. The ability of both bacteria to grow across a range of temperatures (20-30°C) makes them suitable for insect pest control in tropical regions. The study noted that X. bovienii might be more cold-tolerant than P. luminescens, aligning with previous observations. The findings support the symbiotic relationship between these bacteria and entomopathogenic nematodes.
- Xenorhabdus bovienii showed 95-97% similarity to other Xenorhabdus species (X. nematophila, X. japonica, X. beddingii, X. kazodoii, X. poinarii).
- Photorhabdus luminescens also showed high similarity to Xenorhabdus species, suggesting a close relationship.
- At 20°C, both bacteria reached a log concentration of 7.5 after 6 hours.
- At 25°C, X. bovienii showed slower growth compared to P. luminescens.
- P. luminescens exhibited smoother and higher growth at 25°C compared to X. bovienii.
- Both bacteria showed significant growth at 20, 25, and 30°C, with interactions between temperature and time being highly significant.
The study successfully identified Xenorhabdus bovienii and Photorhabdus luminescens using molecular techniques and demonstrated their growth characteristics at different temperatures. These findings contribute to understanding the potential of these bacteria as biological control agents for insect pests, particularly in warmer climates.
- X. bovienii was found to be 96% similar to X. nematophila and X. japonica. (Confirmed in Abstract and Results)
- At 20°C, both bacteria reached a log concentration of 7.5 after 6 hours. (Confirmed in Abstract and Results)
- The study was conducted at temperatures of 20, 25, and 30°C. (Confirmed in Abstract and Methodology)
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